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Publikační činnost
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Record type:
stať ve sborníku (D)
Home Department:
Katedra klinických neurověd (11302)
Title:
Automated segmentation of intracranial carotid atherosclerosis in histological images: assessing the effect of staining
Citace
Reimer, M., Dvorský, O., Szabó, Z., Klempíř, O., Mandys, V., Školoudík, D., Kybic, J. a Krupička, R. Automated segmentation of intracranial carotid atherosclerosis in histological images: assessing the effect of staining.
In:
Medical Imaging 2025: Digital and Computational Pathology 2025-02-18 San Diego.
Bellingham: SPIE, 2025. ISBN 978-151068604-5.
Subtitle
Publication year:
2025
Obor:
Number of pages:
3
Page from:
neuvedeno
Page to:
neuvedeno
Form of publication:
Elektronická verze
ISBN code:
978-151068604-5
ISSN code:
1605-7422
Proceedings title:
Medical Imaging 2025: Digital and Computational Pathology
Proceedings:
Mezinárodní
Publisher name:
SPIE
Place of publishing:
Bellingham
Country of Publication:
Sborník vydaný v zahraničí
Název konference:
Conference venue:
San Diego
Datum zahájení konference:
Typ akce podle státní
příslušnosti účastníků:
Celosvětová akce
WoS code:
001511213700003
EID:
2-s2.0-105004795717
Key words in English:
digital pathology; atherosclerosis; segmentation; staining; U-net; deeplabV3+
Annotation in original language:
Atherosclerosis, a major cause of ischemic stroke worldwide, is characterized by plaque formation, particularly in the carotid bifurcation, leading to arterial stenosis. Traditional histology and light microscopy have been used to study atherosclerotic plaques, but the advent of digital pathology and artificial intelligence has provided new opportunities. In this work, we proposed an automatic segmentation method using convolutional neural networks (U-Net and DeepLabV3+) to delineate atherosclerotic carotid plaque tissue. The study included 835 images of histological slices stained with hematoxylin and eosin and Van Gieson's method from 114 patients. The results showed that DeepLabV3+ outperforms U-Net, achieving high accuracy for tissue types such as lumen, fibrous tissue, atheroma, calcification, and hemorrhage. Staining influenced segmentation results, with Van Gieson's stain excelling in fibrous tissue segmentation, while hematoxylin and eosin showed better results for calcification and hemorrhage. Moreover, the segmentation models facilitated clinical plaque classification, demonstrating good discrimination performance. Our study highlights the potential of deep neural networks in segmenting atherosclerotic plaques while emphasizing the need for careful consideration of staining effects in computerized analysis.
Annotation in english language:
Atherosclerosis, a major cause of ischemic stroke worldwide, is characterized by plaque formation, particularly in the carotid bifurcation, leading to arterial stenosis. Traditional histology and light microscopy have been used to study atherosclerotic plaques, but the advent of digital pathology and artificial intelligence has provided new opportunities. In this work, we proposed an automatic segmentation method using convolutional neural networks (U-Net and DeepLabV3+) to delineate atherosclerotic carotid plaque tissue. The study included 835 images of histological slices stained with hematoxylin and eosin and Van Gieson's method from 114 patients. The results showed that DeepLabV3+ outperforms U-Net, achieving high accuracy for tissue types such as lumen, fibrous tissue, atheroma, calcification, and hemorrhage. Staining influenced segmentation results, with Van Gieson's stain excelling in fibrous tissue segmentation, while hematoxylin and eosin showed better results for calcification and hemorrhage. Moreover, the segmentation models facilitated clinical plaque classification, demonstrating good discrimination performance. Our study highlights the potential of deep neural networks in segmenting atherosclerotic plaques while emphasizing the need for careful consideration of staining effects in computerized analysis.
References
Reference
R01:
RIV/61988987:17110/25:A2603DN4
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